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Table I Description of measures.

From: A study of quality measures for protein threading models

Name CASP-name Type Measure Reference
Murzin - Manual - [3]
crn CRN Global Å/N [20]
arms ARms Global Å [15]
cspc CSpc Global % [15]
csnc CSns Global % [15]
ccrct CCrct Global N [15]
GDT GDT TS Alignment dependent S(N) [20]
MaxSub - Alignment dependent S(Å,N) [22]
LGscore - Alignment dependent S(Å,N) this work
S - Alignment dependent S(Å,N) this work
sf0 sf0 Alignment independent N [21]
sf4 sf0+sf4 Alignment independent N [21]
align ALIGN A4 P Alignment independent % [20]
LGA - Alignment independent S(Å,N) this work
eqr1 eqr Alignment independent N [21]
LGscore2 - Alignment independent S(Å,N) this work
acrct ACrct Template based N [15]
aspc ASpc Template based % [15]
asp4 ASp4 Template based % [15]
covr Covr Template based % [15]
sclen SClen Template based % [15]
  1. Å = Rmsd in Ångstrm. N = Number of residues. % = Fraction of residues. S(N) = Score dependent on number of residues. S(Å,N) = Score dependent on quality and number of residues.