From: FastGroup: A program to dereplicate libraries of 16S rDNA sequences
Matching | 5' Trim | 3' Trim | Window | # of Groups | Analysis |
---|---|---|---|---|---|
Direction | Â | Â | Size | Â | Time (~min) |
5' | 1 N in 50 bp | Bact517 | 10 | 54 | 8 |
3' | 1 N in 50 bp | Bact517 | 10 | 48 | 4 |
5' | 1 N in 50 bp | 1 N in 50 bp | 10 | 92 | 12 |
3' | 1 N in 50 bp | 1 N in 50 bp | 10 | 94 | 30 |
5' | 500 bp* | 1 N in 50 bp | 10 | 64 | 5 |
3' | 500 bp* | 1 N in 50 bp | 10 | 55 | 3 |
3' | 1 N in 50 bp | Bact517 | 5 | 49 | <1 |
3' | 1 N in 50 bp | Bact517 | 10 | 48 | 4 |
3' | 1 N in 50 bp | Bact517 | 25 | 51 | 67 |