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Table 4 Effects of using only partial sequences during the Grouping step.

From: FastGroup: A program to dereplicate libraries of 16S rDNA sequences

Matching Direction % of Sequence Used # of Groups Analysis Time (~min)
5' 100 54 8
5' 90 45 1
5' 80 44 <1
3' 100 48 4
3' 90 37 1
3' 80 28 <1