From: Homology Induction: the use of machine learning to improve sequence similarity searches
PDB 1MLA Malonyl-Co-enzyme A Acyl Carrier Protein Transacylase | |
---|---|
HI all | Â |
A protein is homologous if | |
a1 | it has the word 'synthase' in its description line and |
 | it is in the 10th decile of predicted secondary structures a coil of length level 4. |
HI seq | Â |
A protein is homologous if | |
s1 | it has in the 10th decile of predicted α-helices a helix of length level 3 and |
 | it has in the 10th decile of predicted β-strands a strand of length level 1. |