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Table 1 Comparison between SVMHC, SYFPEITHI (SYF) and HLA_BIND (HLA) of the six alleles common between them.

From: Prediction of MHC class I binding peptides, using SVMHC

Dataset Mc percentage correct predictions
MHC Length Size SVMHC SYF HLA SVMHC SYF HLA
Overall - - 0.85 0.75 0.62 95% 91% 87%
HLA-A*0201 9 113 0.78 0.77 0.77 90% 89% 89%
HLA-A*0201 10 40 0.70 0.61 0.61 87% 80% 83%
HLA-A1 9 28 0.96 0.93 0.96 98% 97% 98%
HLA-A3 9 73 0.80 0.73 0.71 91% 86% 84%
HLA-B*8 9 25 0.79 0.79 0.82 91% 91% 92%
HLA-B*2705 9 29 1.00 0.92 0.93 100% 95% 97%
  1. The tables shows the MHC-type, the length of the binding peptides, the number of experimentally verified binders, the Matthew correlation coefficient (Mc) and the percentage correct predictions.