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Table 1 FunSpec-searchable public databases

From: FunSpec: a web-based cluster interpreter for yeast

Resource Website Publication
Munich Information Center for Protein Sequences (MIPS) http://mips.gsf.de/proj/yeast/CYGD/db/index.html [2]
Gene Ontology (GO) http://www.geneontology.org/ [10]
Simple Modular Architecture Research Tool http://smart.embl-heidelberg.de/ [11]
Protein families database of alignments and HMMs http://www.sanger.ac.uk/Software/Pfam/ [12]