Table 4 Specificity, sensitivity and precision estimates for M. tuberculosis, H. pylori J99 and B. subtilis.
From: EasyGene – a prokaryotic gene finder that ranks ORFs by statistical significance
M. tuberculosis | |||
|---|---|---|---|
Data set | EasyGene | GmS | Frame |
A'-% found | 96.7 | 97.2 | 96.0 |
A'-% exact | 89.1 | 80.9 | 87.9 |
B'-% found | 96.8 | 97.1 | 96.3 |
T-% found | 96.9(96.6) | 97.3 | 96.4 |
Genome | 3749 | 3983 | 4341 |
zero order | 0 | - | 8 |
first order | 3 | - | 2 |
third order | 2 | - | 12 |
shadows | 1 | 0 | 1 |
H. pylori J99 | |||
Data set | EasyGene | GmS | Frame |
A'-% found | 99.2 | 99.2 | 99.2 |
A'-% exact | 97.5 | 95.7 | 96.7 |
B'-% found | 100 | 99.6 | 98.9 |
T-% found | 99.7(98.8) | 99.5 | 99.1 |
Genome | 1491 | 1518 | 1479 |
zero order | 2 | 1479 | 2 |
first order | 1 | 336 | 2 |
third order | 0 | 403 | 0 |
shadows | 2 | 0 | 0 |
B. subtilis | |||
Data set | EasyGene | GmS | Frame |
A'-% found | 99.3 | 98.1 | 98.8 |
A'-% exacts | 94.8 | 94.1 | 93.3 |
B'-% found | 99.2 | 99.0 | 98.2 |
T-% found | 99.3(99.2) | 99.0 | 98.4 |
Genome | 4083 | 4221 | 4006 |
zero order | 1 | 675 | 0 |
first order | 2 | 457 | 0 |
third order | 1 | 813 | 2 |
shadows | 0 | 0 | 0 |