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Table 1 Different transcription factors in AtTFDB Different transcription factor families in AtTFDB. The queries used to identify and classify TFs into different families are mentioned in column 3.

From: AGRIS: Arabidopsis Gene Regulatory Information Server, an information resource of Arabidopsis cis-regulatory elements and transcription factors

Transcription Factor Family

Number of Members in AtTFDB

Members Identified Using

AB13VP1

18

Identify domain and blast

Alfin-like

7

Iterative blast

AP2-EREBP

118

Identify domain and blast

ARF

21

Identify domain and blast

ARR-B

12

Identify domain and blast

bHLH

147

Iterative blast

bZIP

70

TAIR website

C2C2 (Zn) CO-like

28

Identify domain and blast

C2C2 (Zn) Dof

33

Identify domain and blast

C2C2 (Zn) GATA

24

Identify domain and blast

C2C2 (Zn) YABBY

4

Identify domain and blast

C2H2

91

Iterative blast

C3H

125

Iterative blast

CCAAT-Dr1

2

Identified in literature

CCAAT-HAP2

10

Identify representative protein and blast

CCAAT-HAP3

10

Identify representative protein and blast

CCAAT-HAP5

13

Identify representative protein and blast

CPP (Zn)

7

Iterative blast

E2F-DP

8

Identified in literature

EIL

6

Iterative blast

G2-like

41

Identify domain and blast

GRAS

24

Identify domain and blast

HB

60

Identify domain and blast

HSF

19

Identify domain and blast

MADS

98

Iterative blast

MYB

132

TAIR website

MYB-related

8

Iterative blast

NAC

89

Identify domain and blast

SBP

17

Identify domain and blast

TCP

25

Iterative blast

Trihelix

29

Iterative blast

TUB

10

Identify representative protein and blast

WRKY

69

TAIR website

Orphans

1

Documentation