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# Table 2 List of Normalization Methods

From: Evaluation of normalization methods for microarray data

List of normalization methods including print-tip scale normalization | ||
---|---|---|

Method | Notation | Description |

O | Original data | |

Global | G | Global median normalization |

GP | Global median normalization on each print-tip | |

GPS | Global median normalization on each print-tip with scale normalization | |

G.s | Global median normalization and between-slide scale normalization | |

GP.s | Global median normalization on each print-tip and between-slide scale normalization | |

GPS.s | Global median normalization on print-tip with scale normalization and between-slide scale normalization | |

Linear | L | Intensity dependent linear regression normalization |

LP | Intensity dependent linear regression normalization on each print-tip | |

LPS | Intensity dependent linear regression normalization on each print-tip with scale normalization | |

L.s | Intensity dependent linear regression normalization and between-slide scale normalization | |

LP.s | Intensity dependent linear regression normalization on each print-tip and between-slide scale normalization | |

LPS.s | Intensity dependent linear regression normalization on each print-tip with scale normalization and between-slide scale normalization | |

Nonlinear | N | Intensity dependent nonlinear regression normalization (LOWESS) |

NP | Intensity dependent nonlinear regression normalization (LOWESS) on each print-tip | |

NPS | Intensity dependent nonlinear regression normalization (LOWESS) on each print-tip with scale normalization | |

N.s | Intensity dependent nonlinear regression normalization (LOWESS) and between-slide scale normalization | |

NP.s | Intensity dependent nonlinear regression normalization (LOWESS) on each print-tip and between-slide scale normalization | |

NPS.s | Intensity dependent nonlinear regression normalization (LOWESS) on each print-tip with scale normalization and between-slide scale normalization |