From: Evaluation of normalization methods for microarray data
List of normalization methods including print-tip scale normalization | ||
---|---|---|
Method | Notation | Description |
O | Original data | |
Global | G | Global median normalization |
GP | Global median normalization on each print-tip | |
GPS | Global median normalization on each print-tip with scale normalization | |
G.s | Global median normalization and between-slide scale normalization | |
GP.s | Global median normalization on each print-tip and between-slide scale normalization | |
GPS.s | Global median normalization on print-tip with scale normalization and between-slide scale normalization | |
Linear | L | Intensity dependent linear regression normalization |
LP | Intensity dependent linear regression normalization on each print-tip | |
LPS | Intensity dependent linear regression normalization on each print-tip with scale normalization | |
L.s | Intensity dependent linear regression normalization and between-slide scale normalization | |
LP.s | Intensity dependent linear regression normalization on each print-tip and between-slide scale normalization | |
LPS.s | Intensity dependent linear regression normalization on each print-tip with scale normalization and between-slide scale normalization | |
Nonlinear | N | Intensity dependent nonlinear regression normalization (LOWESS) |
NP | Intensity dependent nonlinear regression normalization (LOWESS) on each print-tip | |
NPS | Intensity dependent nonlinear regression normalization (LOWESS) on each print-tip with scale normalization | |
N.s | Intensity dependent nonlinear regression normalization (LOWESS) and between-slide scale normalization | |
NP.s | Intensity dependent nonlinear regression normalization (LOWESS) on each print-tip and between-slide scale normalization | |
NPS.s | Intensity dependent nonlinear regression normalization (LOWESS) on each print-tip with scale normalization and between-slide scale normalization |