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Table 11 Difference in average performance of methods on the Master data set. A positive value indicates that the row method gives a higher accuracy than the column method. Significant differences as calculated by the Wilcoxon Signed Rank Pair test are marked: †p < 0.05; ‡p < 0.01; § p < 0.001.

From: OXBench: A benchmark for evaluation of protein multiple sequence alignment accuracy

 

AMPS

CLUSTALW

PILEUP

PRRP

AMPS

    

CLUSTALW

-0.73

   

PILEUP

-0.98§

-0.25†

  

PRRP

-1.50§

-0.77§

-0.52†

 

PIMA

-1.73§

-1.00§

-0.75†

-0.23