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Table 13 Overall difference in performance of methods on the MSA data set. Symbols as for Table 11.

From: OXBench: A benchmark for evaluation of protein multiple sequence alignment accuracy

  AMPS CLUSTALW PILEUP PRRP PIMA DIALIGN MSA
AMPS        
CLUSTALW -0.73       
PILEUP -0.67 0.06      
PRRP -1.53§ -0.80§ -0.86     
PIMA -1.22§ -0.48† -0.54 0.32†    
DIALIGN -6.77§ -6.03§ -6.10§ -5.23§ -5.55§   
MSA -1.44§ -0.70† -0.76 0.10 -0.22 5.33§  
T-COFFEE 1.71§ 2.45§ 2.39§ 3.25§ 2.93§ 8.48§ 3.15§