From: GeneViTo: Visualizing gene-product functional and structural features in genomic datasets
Online Resources | Type of Data | Essential | URL |
---|---|---|---|
GenBank | Protein Table | yes | |
 | FASTA nucleotide coding regions file | yes | |
 | FASTA Nucleic Acid file | yes | |
 | Cluster of Orthologous Groups (COGs) | no | |
 | Translation table | no | http://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi?mode=c |
Proteome Analysis Server (EBI) | Complete Proteome | yes | |
SwissProt | Â | Â | |
WebCutter | Restriction Enzymes Sites | no | |
PRED-CLASS | Protein Structural Classification | no | |
PRED-TMR2 and orienTM * | Prediction of TM region location and orientation | no | http://biophysics.biol.uoa.gr/PRED-TMR2/, and http://biophysics.biol.uoa.gr/orienTM/ |
SIGNALP | Signal Peptides | no |