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Figure 2 | BMC Bioinformatics

Figure 2

From: Conservation of regulatory elements between two species of Drosophila

Figure 2

Computational module detection for the eve locus in melanogaster and pseudoobscura. The Ahab score plotted for a 20 kb neighborhood of eve as displayed by Gbrowse [44]. The genes are marked as red arrows, and known modules by the colored bars below. The Ahab score for D. melanogaster is plotted as the red filled graph below the module bars. The D. pseuodobscura score in green is aligned to the D. melanogaster sequence by the conserved sequence blocks and linearly interpolated between the blocks. The lowest panel is the conserved blocks as defined by LAGAN, offset vertically for clarity. The right edges of the stripe 3–7 and stripe 5 modules are delimited by gaps in the alignment, but most other boundaries are not. Certain modules score poorly since Ahab was run with the AP gap gene factors only.

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