From: Cross-platform comparison and visualisation of gene expression data using co-inertia analysis
Number of genes in each dataset | Matchminer results | Results of Coinertia Analysis on two datasets | |||||
---|---|---|---|---|---|---|---|
Ross-cDNA* | Staunton-Affymetrix** | Number of "matched" genes ± | RV coefficient | % Inertia | Correlation of ordinations | ||
F1 | F2 | F1 | F2 | ||||
5643 | 3144 | 1416 | 0.85 | 40 | 61 | 0.96 | 0.97 |
2455 | 1169 | 0.86 | 40 | 61 | 0.96 | 0.97 | |
1517 | 776 | 0.88 | 42 | 63 | 0.96 | 0.98 | |
3748 | 3144 | 786 | 0.86 | 30 | 49 | 0.96 | 0.97 |
2455 | 625 | 0.87 | 31 | 50 | 0.97 | 0.97 | |
1517 | 388 | 0.86 | 32 | 51 | 0.97 | 0.97 | |
1415 | 3144 | - | 0.83 | 38 | 62 | 0.95 | 0.96 |
2455 | - | 0.85 | 38 | 62 | 0.95 | 0.97 | |
1517 | - | 0.86 | 40 | 64 | 0.95 | 0.97 | |
1375 | 3144 | 433 | 0.83 | 38 | 62 | 0.95 | 0.96 |
2455 | 370 | 0.84 | 37 | 62 | 0.95 | 0.97 | |
1517 | 269 | 0.86 | 40 | 64 | 0.95 | 0.97 |