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Table 1 Docking Parameters

From: Characterization of the cofactor-binding site in the SPOUT-fold methyltransferases by computational docking of S-adenosylmethionine to three crystal structures

Translation step

2.0 Ã…

Quaternion step

50.0°

Torsion step

50.0°

Translation reduction factor

1/cycle

Quaternion reduction factor

1/cycle

Torsion reduction factor

1/cycle

Elitism

1

Rate of gene mutation

0.02

Rate of crossover

0.8

No of generations for picking worst individual

10

Mean of Cauchy distribution

0

Variance of Cauchy distribution

1

No of iterations of Solis and Wets local search

300

No of consecutive successes before changing rho

4

No of consecutive failures before changing rho

4

Size of local search space to sample

1

Lower bound on rho

0.01