Type of Papillomavirus | Genbank Accession Number | Length of Complete Genome (bps) | Length of Genes (bps) | Fragment Size Distribution (digested by MaeI enzyme1) | ||||||
---|---|---|---|---|---|---|---|---|---|---|
E1 Gene | E6 Gene | E7 Gene | L1 Gene | Number of Fragments | Median Fragment Size (bps) | 5% Percentile (bps) | 95% Percentile (bps) | |||
HPV4 | X70827 | 7353 | 1800 | 422 | 303 | 1550 | 24 | 215 | 54 | 817 |
HPV6a | L41216 | 8010 | 1886 | 452 | 297 | 1502 | 18 | 249 | 43 | 1151 |
HPV6b | X00203 | 7902 | 1930 | 452 | 297 | 1502 | 17 | 207 | 47 | 1241 |
HPV20 | U31778 | 7757 | 1818 | 497 | 309 | 1550 | 24 | 294 | 9 | 781 |
HPV24 | U31782 | 7452 | 1824 | 422 | 291 | 1538 | 13 | 501 | 55 | 1354 |
HPV49 | X74480 | 7560 | 1830 | 416 | 312 | 1529 | 18 | 232 | 24 | 1210 |
HPV63 | X70828 | 7348 | 1857 | 425 | 267 | 1523 | 23 | 221 | 29 | 968 |
HPV13 | X62843 | 7880 | 1941 | 452 | 306 | 1499 | 21 | 352 | 9 | 765 |
HPV29 | U31784 | 7916 | 1983 | 446 | 273 | 1511 | 16 | 435 | 33 | 1003 |
HPV32 | X74475 | 7961 | 1929 | 428 | 315 | 1511 | 21 | 276 | 36 | 881 |
HPV54 | U37488 | 7759 | 1902 | 434 | 288 | 1493 | 28 | 158 | 20 | 815 |
HPV26 | X74472 | 7855 | 1917 | 452 | 315 | 1511 | 20 | 341 | 47 | 877 |
BPV2 | M20219 | 7937 | 1815 | 413 | 384 | 1493 | 27 | 204 | 17 | 809 |
BPV4 | X05817 | 7265 | 1932 | 300 | 363 | 1562 | 19 | 323 | 31 | 750 |
CaninePV | D55633 | 8607 | 1794 | 434 | 294 | 1511 | 24 | 303 | 24 | 715 |
ChimPV | AF020905 | 7889 | 1947 | 458 | 300 | 1505 | 18 | 236 | 35 | 1504 |
Mean | 7778.1 | 1881.6 | 431.4 | 307.1 | 1518.1 | 20.7 | 284.1 | 32.2 | 977.5 |