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Table 2 Similarity of restriction fragment analysis to complete genome sequencing in estimating genetic relatedness between papillomavirus samples

From: A computer simulation analysis of the accuracy of partial genome sequencing and restriction fragment analysis in estimating genetic relationships: an application to papillomavirus DNA sequences

Number of Enzymes

Mantel's r

Partition Metric

 

Mean

Standard Deviation

Maximum

Mean

Standard Deviation

Minimum

1

0.37

0.13

0.54

23.33

1.23

20

2

0.42

0.09

0.55

22.60

1.19

20

3

0.46

0.08

0.58

22.07

1.44

20

4

0.49

0.08

0.60

21.40

1.44

18

  1. Mantel's r is the correlation between matrices of genetic similarity. The partition metric indicates topological similarity of dendrograms, with lower values indicating greater similarity.