Skip to main content

Table 1 Number of Genes with Significant Differences between Tumor and Normal Class in Various Cancer Types under the PPST and ABA tests and the parametric t-test (for comparison)

From: Tests for finding complex patterns of differential expression in cancers: towards individualized medicine

  α = 0.1 α = 0.05
Data Set PPST ABA test (ABA/BAB) PPST ABA test (ABA/BAB) parametric t α = 0.05 **
breast7 572 40/5 326 28/49 313
melanoma15 662 60/202 312 38/133 347
colon45 1788 55/153 1558 46/55 1378
ovarian16 3344 253/63 2060 189/22 1813
lymphoma18 2077 286/42 1114 194/30 1370
lung19 614 40/3 506 35/3 389
  1. *A = tumor sample group, B = normal sample group **pooled variance t