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Table 6 Comparison of coding sequences (CDSs) prediction by IdentiCS and CRITICA from unfinished genome sequences of K. pneumoniae with different genome sequence coverage.

From: IdentiCS – Identification of coding sequence and in silico reconstruction of the metabolic network directly from unannotated low-coverage bacterial genome sequence

  3.9 × genome data 7.9 × genome data
  CRITICA IdentiCS CRITICA IdentiCS
Number of all CDSs 6734 5650 5135 5261
CDSs shared by both programs 6332* 4302 4823 4512
CDSs merely identified by the respective program 402 1348 312 749
  1. *CDSs predicted by IdentiCS can cover more than one smaller CDSs predicted by CRITICA.