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Table 6 Comparison of coding sequences (CDSs) prediction by IdentiCS and CRITICA from unfinished genome sequences of K. pneumoniae with different genome sequence coverage.

From: IdentiCS – Identification of coding sequence and in silico reconstruction of the metabolic network directly from unannotated low-coverage bacterial genome sequence

 

3.9 × genome data

7.9 × genome data

 

CRITICA

IdentiCS

CRITICA

IdentiCS

Number of all CDSs

6734

5650

5135

5261

CDSs shared by both programs

6332*

4302

4823

4512

CDSs merely identified by the respective program

402

1348

312

749

  1. *CDSs predicted by IdentiCS can cover more than one smaller CDSs predicted by CRITICA.
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BMC Bioinformatics

ISSN: 1471-2105

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