Table 1 Identitag as a tag identifier. This table provides examples illustrating various situations regarding tag identification using Identitag.
Tag sequence | Transcript identification number | Protein identification number | Protein description | |||
|---|---|---|---|---|---|---|
1. Unidentified | CATGACAGCACGGG | |||||
one EST cluster | CATGAAAATTCTAA | BBSRC603768552F1.1.3.1 | ||||
2. EST cluster(s) | redundant EST clusters | CATGAGAATAATCT | BBSRC602906088F1.1.3.4 BBSRC602906088F1.1.3.5 AJ508717 | |||
more than one EST clusters | ||||||
non redundant EST clusters | CATGAAAGACTTCT | 12595754.1.3.1 BBSRC603772421F1.1.3.1 AB038230.1.3.477 | ||||
3. Annotated (one annotated transcript sequence) | CATGAAAGCCAAGA | J02828 | P09207 | Tubulin beta-6 chain | ||
4. Annotated (different annotated transcript sequences with the same annotation) | CATGAACTAAAACC | BBSRC603002454F1.1.3.1 BSRC603002454F1.1.3.10 | P18937 P18937 | NADH-ubiquinone oxidoreductase chain 2 NADH-ubiquinone oxidoreductase chain 2 | ||
5. More than one different annotations | redundant annotations | CATGCACTTTGTAT | BBSRC603008189F1.1.3.1 BBSRC603122686F1.1.3.2 AF251344 | Q8QG60 Q9NP50 Q8QG52 | Cryptochrome 2 Hypothetical protein Cryptochrome 2 (Fragment) | |
non redundant : multiple match | CATGGTGGTGTGGT | AB038230.1.3.135 gcag0018c.a.01_5.1.3.1 | P16039 Q8R4X1 | Nucleophosmin Alkaline ceramidase |