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Table 2 Tag counts from sample SAGE libraries. Counts and proportions of tags ATTTGAGAAG, TGCTGCCTGT and GCGAAACCCT in 8 colon libraries from Zhang et al. [2]; two normal colon (NC), two primary tumors (TU) and four cell lines.

From: Overdispersed logistic regression for SAGE: Modelling multiple groups and covariates

Group

Normal Colon

Primary Tumor

Cell Lines

Library

NC1

NC2

TU98

TU102

CACO2

HCT116

RKO

SW837

ATTTGAGAAG

320

600

312

549

246

65

41

52

TGCTGCCTGT

0

1

1

15

9

1

12

27

GCGAAACCCT

167

566

64

98

33

47

40

27

Library Size

49610

48479

41371

55700

60682

55641

51294

61148

Propn ATT..(%)

0.65

1.24

0.75

0.99

0.41

0.12

0.08

0.09