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Table 2 Tag counts from sample SAGE libraries. Counts and proportions of tags ATTTGAGAAG, TGCTGCCTGT and GCGAAACCCT in 8 colon libraries from Zhang et al. [2]; two normal colon (NC), two primary tumors (TU) and four cell lines.

From: Overdispersed logistic regression for SAGE: Modelling multiple groups and covariates

Group Normal Colon Primary Tumor Cell Lines
Library NC1 NC2 TU98 TU102 CACO2 HCT116 RKO SW837
ATTTGAGAAG 320 600 312 549 246 65 41 52
TGCTGCCTGT 0 1 1 15 9 1 12 27
GCGAAACCCT 167 566 64 98 33 47 40 27
Library Size 49610 48479 41371 55700 60682 55641 51294 61148
Propn ATT..(%) 0.65 1.24 0.75 0.99 0.41 0.12 0.08 0.09