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Table 3 Seed experiments. Number of high-scoring similarities found with different seed patterns

From: Improved hit criteria for DNA local alignment

sequences B 9 B 9 tr B 11 B 11 tr M 9 M 9 tr M 11 M 11 tr
IX/V 323 336 275 279 312 325 274 293
IX/XVI 342 354 271 280 349 357 280 295
XVI/IV 1314 1361 1124 1172 1309 1348 1180 1235
MC58/Z2491 361896 380028 341113 364792 385444 392164 359348 366759