Figure 7From: Calibration and assessment of channel-specific biases in microarray data with extended dynamical rangeLog-ratio and log-intensity plots of raw, translated, and calibrate signals. The affine transformation gives curvature in the M versus A plots, which is corrected for by the affine normalization method. The three scatter plots show the within-channel log-ratio versus the log-intensity for each of the six PMT pairs based on the same data as in Figure 1. Left: Observed signal for different PMT pairs. For each pair the estimated has been marked with a circle, cf. Figure 1. Mid: Bias corrected signals. Right: Bias and scale calibrated signals. The range of the M axis is twice the range of the A axis so that (6)-(7) appear as a rotation in the plots.Back to article page