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Table 4 Mean and standard deviation of bias estimates. Mean and standard deviation of the bias estimates of all arrays and for each signal quantification method. The median and MAD (median absolute deviation) of ditto gives very similar results expect for Agilent's pixel estimates, which become smaller but are still greater than the others.

From: Calibration and assessment of channel-specific biases in microarray data with extended dynamical range

image

method

Agilent

Axon

Agilent

Axon

Spot

18.6 ± 1.40

16.1 ± 0.792

19.8 ± 0.958

17.0 ± 0.633

GenePix

21.1 ± 1.55

17.8 ± 0.529

21.5 ± 1.05

20.0 ± 0.433

pixels

29.8 ± 10.4

18.7 ± 0.446

27.0 ± 7.76

22.0 ± 0.537