Table 1 Sequences and annotations for each dataset.
From: GOtcha: a new method for prediction of protein function assessed by the annotation of seven genomes
| Â | Â | Â | Sequences annotated by ontology | ||
|---|---|---|---|---|---|
Dataset | Total associations | Total sequences | Cellular Component | Molecular Function | Biological Process |
Arabidopsis thaliana | 290952(94824) | 20108(7969) [451] | 14851(2115) | 14467(7555) | 10454(3481) |
Drosophila melanogaster | 129694(29311) | 7536(7536) [0] | 3613(3589) | 6528(6520) | 3730(3723) |
Homo sapiens | 409153(67357) | 21251(9074) [659] | 13723(6516) | 19362(7328) | 17080(7707) |
Plasmodium falciparum | 36952(32536) | 2406(2209) [41] | 2061(1227) | 2094(2094) | 2044(2044) |
Saccharomyces cerevisiae | 136938(36267) | 6910(6849) [0] | 6751(6751) | 6831(6831) | 6899(6838) |
Vibrio cholerae | 42616(42616) | 2924(2924) [27] | 189(189) | 2721(2721) | 2923(2923) |
Caenorhabditis elegans | 109360(18626) | 6916(1870) [199] | 3054(650) | 5746(282) | 5102(1557) |