From: Performance of a genetic algorithm for mass spectrometry proteomics
Algorithm | Test Set Accuracy 25th, 75thPercentile | Median # Clusters | Median # Markers | Proportion of Perfect Chromosomes |
---|---|---|---|---|
GA(p1 = 0, p2 = 0) | .83, .87 | 90 | 11 | 1.0 |
GA(0, .001) | .80, .87 | 93 | 11 | 1.0 |
GA(0, .002) | .82, .87 | 92.5 | 9 | 1.0 |
GA(.002, 0) | .87, .92 | 12 | 19 | .26 |
GA(.002, .001) | .90, .93 | 14 | 13 | .38 |
GA(.002, .002) | .88, .92 | 13 | 7.5 | .20 |
GA(.005, 0) | .87, .92 | 5 | 20 | .02 |
GA(.005, .001) | .87, .90 | 5 | 10 | .02 |
GA(.005, .002) | .87, .92 | 5 | 6.5 | 0 |
GA(.008, 0) | .85, .90 | 3.5 | 18.5 | 0 |
GA(.008, .001) | .85, .89 | 4 | 8.5 | 0 |
GA(.008, .002) | .85, .90 | 4 | 6 | 0 |
Best GA | .87, .91 | 7 | 10 | .12 |
Boosting | .93, .97 | NA | NA | NA |
PAM | .80, .84 | NA | NA | NA |