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Figure 4 | BMC Bioinformatics

Figure 4

From: Optimal cDNA microarray design using expressed sequence tags for organisms with limited genomic information

Figure 4

Summary of annotated EST clusters and unique representativeness of the selected probes in three GO domains: molecular function, biological process and cellular component. EST clusters contain at least one annotated sequences (noted as "cluster annotated*" in the legend) and unique annotations of selected microarray probes in each of the three Gene Ontology (GO) domains. (A) Molecular Function (MF) (B) Biological Process (BP) and (C) Cellular component (CC). Although fewer annotated EST clusters (number of clusters containing at least one annotated sequences) were formed using single linkage method compared to those selected using the other two linkage methods given a fixed number of cluster within the middle range (~60–442 clusters), more functionally unique probes were selected among the formed clusters by single linkage method

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