Figure 5From: Optimal cDNA microarray design using expressed sequence tags for organisms with limited genomic informationAverage within cluster percent identity and the lengths of high scoring pair (HSP) segments throughout clustering process. The percentage identity and lengths of HSP further confirmed the observations in Figure 2 that sequences within a cluster formed using single linkage could potentially be fragments of same gene/transcript, but fragments of sequences might not overlap that average within-cluster percent identity is lower when using single linkage method. The average percent identity is the highest when using average linkage method as expected.Back to article page