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Table 3 Comparison of seven ras family clusters provided by right singular vectors with KOG and Homologen clusters. Only proteins having one of the five strongest projections ("top five") for a given singular vector are used in the comparison. Few genomes have KOG members specifically identified by NCBI, however, most or all of the "top 5" proteins for a given rsv would likely be identified as members of the same KOG family. For 197a (Rab11), the KOG # provided in parentheses is that of the closely related human protein.

From: An SVD-based comparison of nine whole eukaryotic genomes supports a coelomate rather than ecdysozoan lineage

rsv# gi# projection organism GeneName kog# hg#
197a 6679583 0.06900 Mmus Rab11b (0087) 3109
(Rab11) 14249144 0.06892 Rnov Rab11b na 3109
  31209781 0.06827 Agam na na 3109
  31209783 0.06827 Agam na na 3109
  31209785 0.06826 Agam na na 3109
236a 31542143 0.05883 Mmus Arha na 1257
(ApRas) 16923986 0.05883 Rnov Arha2 na 1257
  10835049 0.05873 Hsap RHOA 0393 1257
  28395033 0.05610 Hsap ARHC 0393 22408
  en131312 0.05412 Frub na na na
277 27689505 0.07229 Rnov Rab5c na 20961
(Rab5) 4759020 0.07214 Hsap RAB5C 0092 20961
  31225537 0.07022 Agam na na 20961
  31225545 0.07022 Agam na na 20961
  31225553 0.07022 Agam na na 20961
277a 15718763 0.04278 Hsap KRAS2 0395 2159
(HaRas) 4885425 0.04243 Hsap HRAS 0395 3907
  34861217 0.04243 Rnov Hras1 na 3907
  4505451 0.04176 Hsap NRAS 0395 20564
  34859609 0.04165 Rnov Nras na 20564
350a 9845511 0.07403 Hsap RAC1 0393 23126
(RasC3) 38081613 0.07403 Mmus Rac1 na 23126
  9845509 0.06942 Hsap RAC1b 0393 23126
  4826962 0.06820 Hsap RAC3 0393 3705
  18875380 0.06820 Mmus Rac3 na 3705
387a 34861437 0.03486 Rnov Rab1B na 23689
(Rab1) 21313162 0.03413 Mmus Rab1B na 23689
  13569962 0.03400 Hsap RAB1B 0084 23689
  27709432 0.03400 Rnov Rab1B-like na 27733
  en156199 0.03396 Frub na na na
389a 4758988 0.04851 Hsap RAB1A 0084 3067
(Rab/Ras) 6679587 0.04851 Mmus Rab1A na 3067
  13569962 0.04840 Hsap RAB1B 0084 23689
  en160503 0.04824 Frub na na na
  13592035 0.04811 Rnov Rab1A na 3067