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Table 2 Genomic islands in the genome of Bacillus subtilis.

From: SIGI: score-based identification of genomic islands

Function HMM [kb] MPW [kb] Repeats [kb] Putative Source
PHX: ribosomal proteins   108–155   
P1 prophage 202–220 202–223 202–213 Bacilli
Surfactin   402–410   Bacilli
P2 prophage 529–570 529- 555–567 Bacteria
  570–600 -587 -- Bacteria, Bacilli
P3 prophage 651–664 653–664 -- Bacilli
Site-specific recombinase 738–747 737–746 -- Bacillus
yesJ-yesZ, ABC transporter   752–782   Bacillales
Multidrug-efflux transporter 818–822   --  
-- 1124–1130   --  
P4 prophage 1262–1270 1275–1280 -- Bacteria
PBSX prophage (1320–1348) --   --  
-- 1397–1399   1385–1424  
-- 1442–1447   --  
-- 1478–1482   --  
P5 prophage 1879–1891 1879–1901 -- Bacteria, Bacilli
-- 2038–2041   --  
P6 prophage 2046–2073   2050–2060  
SPβ prophage 2151–2286 2152–2286 -- Bacteria, Bacillales, Chlamydophila, Streptococcus
Skin prophage 2652–2701 2652- 2654–2701 Bacteria, Bacilli, Streptococcus
P7 prophage 2707–2756 -2747 2725–2735 Bacteria, Bacilli
Competence 3253–3257 3252–3257 -- Enterobacteriaceae, Bacillus cereus group
Arsenic resistance regulator 3463–3467   3462–3469  
PHX: eno, pgm, tpi, pgk, gap    3475–3482  
-- --   3608–3634  
Cell wall synthesis 3658–3685 3658–3684 3665–3672 Bacteria, Bacilli
Nitrate reductase   3819–3831   Bacillales
yxiQ-yxxG, bglS, deaD   4009–4022   Bacteria
ABC transporter 4123–4134 4122–4139 -- Bacteria
ABC transporter 4171–4176 4168- 4170–4176 Bacteria, gamma subdivision
Streptothricin, tetracycline, mercury regul. 4184–4190 -4193 4189–4190 Bacteria
  1. Numbers give positions on the chromosome in kb. The values in the columns HMM and Repeats are as from [24]. The column "Putative Source" lists predictions generated by SIGI.