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Table 1 Restriction enzymes with known crystallographic structure

From: Frequent occurrence of recognition Site-like sequences in the restriction endonucleases

NAME Recognition Sequence (RS) Codon Potential Crystal Name AC-# Gene-Bank N.A.-residue# AC-# Swiss-Prot A.A.-residue# RS-like Oligonucleotides (-# of copy)
BamHI G†GATCC GDISPRLA 1BHM X55285 642 P23940 213 GGCCTA-1, GCCTA-1, TAGG-1, GGAT-2, AGGC-1, GATC-1
BgIII A†GATCT RNISLX 1DFM U49842 672 - 223 AGATC-1, TAGAT-1, AGAT-5, GATC-2, CTAG-2
EcoRI G†AATTC ENIPSR 1ERI J01675 909 P00642 302 CGAATT-1, AGCTTA-1, TTCGA-2, AAGCT-3, AATTC-2, AATT-8, TTAA-6, TAAG-3, CTTA-3, TCGA-3, GAAT-4, AAGC-3, TTCG-1
EcoRV GAT†ATC NIPSR 1AZO X00530 738 P04390 245 ATATCG-1, ATATC-1, GATAT-3, TATAG-1, ATAT-11, TATC-2, GATA-2, TATA-4, CTAT-2
NaeI GCC†GGC APRG 1IAW U09581 954 - 317 GGCGCCGG-1, GCCGCGG-1, CGGCGC-2, GCCGCG-1, CGCGC-2, GCCGG-1, CGCGG-2, GCGGC-2, GGCCG-2, CGGCC-1, CGGC-3, CCGG-5, GGCG3, CCGC-4, GCCG-3, GGCC-1, CGCG-4
NgoMIV G†CCGGC APRG 1FIU M86915 861 P31032 286 CCGGCG-1, GCCGC-4, GGCG-1, GCCG-3, CGCC-2, CCGC-1, GCGG-2, CGGC-2
PvuII CAG†CTG OSALCA 1PVI AF305615 474 P23657 157 AGCT-2, GCTG-1
  1. AC#: accession number, N.A.: nucleic acid, A.A.: amino acid, †: cut site