From: Frequent occurrence of recognition Site-like sequences in the restriction endonucleases
NAME | Recognition Sequence (RS) | Codon Potential | Crystal Name | AC-# Gene-Bank | N.A.-residue# | AC-# Swiss-Prot | A.A.-residue# | RS-like Oligonucleotides (-# of copy) |
---|---|---|---|---|---|---|---|---|
BamHI | G†GATCC | GDISPRLA | 1BHM | X55285 | 642 | P23940 | 213 | GGCCTA-1, GCCTA-1, TAGG-1, GGAT-2, AGGC-1, GATC-1 |
BgIII | A†GATCT | RNISLX | 1DFM | U49842 | 672 | - | 223 | AGATC-1, TAGAT-1, AGAT-5, GATC-2, CTAG-2 |
EcoRI | G†AATTC | ENIPSR | 1ERI | J01675 | 909 | P00642 | 302 | CGAATT-1, AGCTTA-1, TTCGA-2, AAGCT-3, AATTC-2, AATT-8, TTAA-6, TAAG-3, CTTA-3, TCGA-3, GAAT-4, AAGC-3, TTCG-1 |
EcoRV | GAT†ATC | NIPSR | 1AZO | X00530 | 738 | P04390 | 245 | ATATCG-1, ATATC-1, GATAT-3, TATAG-1, ATAT-11, TATC-2, GATA-2, TATA-4, CTAT-2 |
NaeI | GCC†GGC | APRG | 1IAW | U09581 | 954 | - | 317 | GGCGCCGG-1, GCCGCGG-1, CGGCGC-2, GCCGCG-1, CGCGC-2, GCCGG-1, CGCGG-2, GCGGC-2, GGCCG-2, CGGCC-1, CGGC-3, CCGG-5, GGCG3, CCGC-4, GCCG-3, GGCC-1, CGCG-4 |
NgoMIV | G†CCGGC | APRG | 1FIU | M86915 | 861 | P31032 | 286 | CCGGCG-1, GCCGC-4, GGCG-1, GCCG-3, CGCC-2, CCGC-1, GCGG-2, CGGC-2 |
PvuII | CAG†CTG | OSALCA | 1PVI | AF305615 | 474 | P23657 | 157 | AGCT-2, GCTG-1 |