Skip to main content

Advertisement

Figure 7 | BMC Bioinformatics

Figure 7

From: Selection of informative clusters from hierarchical cluster tree with gene classes

Figure 7

Comparison of cluster trees using correlating clusters. A. Comparison of negative log10-p-values for correlating clusters between average (X-axis) and complete linkage (Y-axis) cluster trees. The figure also includes x = y line to ease the comparison. Notice that although many clusters show quite similar results the clusters with bigger negative log-p-values show bigger log-p-values in average linkage method. Red circles show comparison of results obtained with SGD classes and the blue circles show the same comparison obtained with MIPS classes. B. Comparison of negative log10-p-values for correlating clusters between Ward's method (X-axis) and complete linkage (Y-axis) cluster trees. Note the similarity to the scatter in part A. C. Comparison of negative log10-p-values for correlating clusters between average linkage (X-axis) and Ward's method (Y-axis) cluster trees. Here the scatter differs from other scatters (A and B) with clusters showing more scatter along the x = y line.

Back to article page