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Figure 2 | BMC Bioinformatics

Figure 2

From: Identification of regions in multiple sequence alignments thermodynamically suitable for targeting by consensus oligonucleotides: application to HIV genome

Figure 2

Gag plot of conservation made with window of 30 nucleotides. Average conservation for each consequent 30 nucleotides is shown. Conserved regions that are thermodynamically optimal for oligonucleotide targeting are highlighted in green. The last nucleotide of each fragment is highlighted in conservation histogram.

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