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Table 3 Significant motifs associated to DNA replication and nucleosome.

From: Computational identification of transcription factor binding sites by functional analysis of sets of genes sharing overrep-resented upstream motifs

motif C F P TF
AAACGCG - - DNA replication MBP1 SWI6
AGACGCGT - - DNA dependent DNA replication  
 GACGCGTA - - DNA replication and chromosome cycle MBP1 SWI6
 AACGCG - - DNA replication MBP1 SWI6
 GACGCG - - mitotic sister chromatid cohesion MBP1 SWI4 SWI6
  ACGCG replication fork - DNA metabolism MBP1 SWI4 SWI6
  ACGCGT - - DNA replication MBP1 SWI6
  ACGCGTCG - - mitotic sister chromatid cohesion MBP1 SWI6
   CGCGTA - - DNA metabolism MBP1
ARACGCGTMG
AACCGCGT nucleosome - - HIR1 HIR2
 AATGCGA nucleosome - - HIR1 HIR2
  ATGCGAA nucleosome - chromatin assembly/disassembly HIR1 HIR2
   CGCGA nucleosome - - MBP1 SWI4 SWI6
    GCGCTCG nucleosome - -  
AAMYGCGAWCG
CGGGGAGA nucleosome - -