Skip to main content

Table 4 Other motifs with significant intersection with ChIP data.

From: Computational identification of transcription factor binding sites by functional analysis of sets of genes sharing overrep-resented upstream motifs

motif

C

F

P

TF

GATGAGTC

-

-

amino acid metabolism

GCN4

 ATGACT

-

-

non-protein amino acid metabolism

GCN4

 GTGAGTCA

-

-

amino acid metabolism

GCN4

 ATGAGTCA

-

-

amino acid metabolism

GCN4

  TGAGTCAC

-

-

amino acid biosynthesis

GCN4

  AGAGTCAT

-

-

amino acid metabolism

 

   GAGTCA

-

-

amino acid biosynthesis

BAS1 GCN4

GATGAGTCAY

TGAAAC

-

-

sexual reproduction

DIG1 STE12

TGAAACA

-

-

sexual reproduction

DIG1 STE12

TGAAACA

ACTGTG

-

-

sulfur amino acid transport

MET4

  TGTGGC

-

-

sulfur metabolism

MET4 MET31

ACTGTGGC

TCTAGAA

-

heat shock protein

protein folding

HSF1