Table 1 Estimated Hydrophobic Effect for residual burial. Estimated Hydrophobic Effect for residual burial shown in the second column for each amino acid. These values are substituted for individual amino acid forming a property plane for further preprocessing of inputs in SSS. The values are in kilocalories/mol.
From: Detailed protein sequence alignment based on Spectral Similarity Score (SSS)
Amino Acid | value [kcal/mol] |
|---|---|
Gly | 1.18 |
Ala | 2.15 |
Val | 3.38 |
Ile | 3.88 |
Leu | 4.10 |
Pro | 3.10 |
Cys | 1.20 |
Met | 3.43 |
Phe | 3.46 |
Trp | 4.11 |
Tyr | 2.81 |
His | 2.45 |
Thr | 2.25 |
Ser | 1.40 |
Gln | 1.65 |
Asn | 1.05 |
Glu | 1.73 |
Asp | 1.13 |
Lys | 3.05 |
Arg | 2.23 |