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Table 2 Calibration factors for three evolutionary models

From: Scoredist: A simple and robust protein sequence distance estimator

Dayhoff 1.3370
JTT 1.2873
MV 1.1775
  1. The raw distance d r is scaled by the calibration factor c, which was obtained by least squares fitting of 2000 artificial protein sequence alignments generated for the matrices as given by Dayhoff, JTT (Jones-Taylor-Thornton), and MV (Müller-Vingron).