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Table 1 Solution set sizes Distribution for the inferred solution set sizes, compared to the distribution of indegree in the actual network for the simulations. These statistics were produced from 250 random networks run using the following parameter values: N = 50, P = 12, and q = 0.5. The table illustrates how the algorithm overestimates the number of solutions with zero inputs.

From: Using large-scale perturbations in gene network reconstruction

|Y i | 0 1 2 3 ≥ 4
inferred 0.57 0.12 0.07 0.05 0.19
actual 0.37 0.24 0.15 0.10 0.14