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Table 2 Comparative analysis of literature mining tools. Eleven known p53 target genes were analyzed using five methods. The numbers represent the number of reoccurrences of each gene with the term "P53".

From: MILANO – custom annotation of microarray results using automatic literature searches

Gene Id Primary Symbol MILANO – GeneRIFa MILANO – Medlinea PubMatrixb BEAR GeneInfoa[17] MicroGeniec
1026 CDKN1A 74 4180 49 50 3058
1647 GADD45A 7 281 21 45 313
2810 SFN 2 25 25 25 0
3486 IGFBP3 1 42 36 42 36
355 TNFRSF6 25 740 418 43 707
4583 MUC2 2 29 29 29 29
4609 MYC 21 1715 1715 1715 1715
5111 PCNA 13 1269 1173 3671 1173
59 ACTA2 1 0 0 0 0
7520 XRCC5 1 52 42 42 583
9618 TRAF4 2 1 1 1570 326
  1. aThe search was performed with LocusLink ids as the primary search terms.
  2. bThe search was performed with the primary gene symbols as the primary search terms.
  3. cThe search was performed with UniGene ids as the primary search terms.