Skip to main content

Table 4 Differences found between AutoFACT and PEDANT annotations for Saccharomyces cerevisiae

From: AutoFACT: An Auto matic F unctional A nnotation and C lassification T ool

ID

PEDANT Annotation

AutoFACT Annotation

AutoFACT Score

AutoFACT E-value

AutoFACT % Identity

yal048c

vacuolar aspartic protease

GON1; possible rho-like GTPase involved in secretory vesicle transport

1724

0.0

50% (360/718)

yhr064c

SSZ1 – regulator protein involved in pleiotropic drug resistance

multi-domain protein

651

3.00E-68

28% (154/539)

yhr046c

INM1 – inositol-1(or 4)-monophosphatase

*Protein qutG related cluster

378

4.00E-35

31% (99/310)

yhr143w

DSE2 – glucan 1,3-beta-glucosidase activity

multi-domain protein

229

2.00E-19

25% (70/278)

yhl043w

ECM34 – involved in cell wall biogenesis and architecture

DUP domain-containing protein

205

5.00E-17

36% (26/72)

yal047c

SPC72 – Stu2p Interactant

*Repeat organellar protein related cluster

160

2.00E-09

20% (124/620)

yhr167w

THP2 – subunit of the THO complex, which appears to functionally connect transcription elongation with mitotic recombination

*Myosin heavy chain related cluster

129

2.00E-06

24% (51/210)

yhr154w

RTT107 – Establishes Silent Chromatin

BRCT domain-containing protein

118

4.00E-06

28% (24/83)

yhl020c

OPI1 – negative regulator of phospholipid biosynthesis pathway

multi-domain protein

114

5.00E-06

24% (30/123)

yhr196w

UTP9 – U3 snoRNP protein

Borrelia_orfA domain-containing protein

104

1.00E-04

19% (75/376)

  1. Annotations in bold are the same as the original annotations found in the Saccharomyces Genome Database. AutoFACT annotations marked with an asterisk (*) are considered false positives.