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Figure 2 | BMC Bioinformatics

Figure 2

From: Multiple sequence alignments of partially coding nucleic acid sequences

Figure 2

Application of the scoring model to a hypothetical alignment. Note that there are no amino acid contributions in the right hand part of the example because of the single indel that causes a frameshift. For illustration we show BLOSUM62 scores and simple scores for nucleic acids and gaps rather than the rescaled default values (His/Gln has score 0).

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