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Figure 4 | BMC Bioinformatics

Figure 4

From: High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID)

Figure 4

Clustered image map (CIM) 5,6 showing transcription factor binding sites versus GO categories in a patient with CVID. Red indicate FDR = 0.0, and yellow indicates FDR > 1.0 or a missing value. Clustering was performed with the Pearson correlation metric and average linkage algorithm. The inset is a blow-up of the first few transcription factor binding site names. A full-size version in which all the transcription factor binding site names are readable is available in Supplementary Materials [see Additional file 8]. There are 35 rather than 30 GO categories because this result was computed with a more recent version of the GO Consortium database.

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BMC Bioinformatics

ISSN: 1471-2105

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