From: Normal uniform mixture differential gene expression detection for cDNA microarrays

Type of Experiment | Multiple Replicates? | Dye Swap? | Quantity of Interest | Mean Normalization | Variance Normalization |
---|---|---|---|---|---|

Sample 1 = Red, Sample 2 = Green | No | NA | Equation (4) | Equation (5) | |

Sample 1 = Red, Sample 2 = Green | Yes | No | Equation (4) | Equation (6) | |

Sample = Red, Sample = Green Sample = Green, Sample = Red | Yes | Yes | NA | Equation (6) | |

Sample 1 & 2 = Red, Reference = Green | Yes | NA | M, Equation (7) | Equation (9) | Equation (11) |