name | type | N | ref | Web source | Files / accessions | medium |
---|---|---|---|---|---|---|
Saccharomyces cerevisiae | ||||||
Sce-1 | prot | 2014 | [51] | 1.ref-abund.xls, column G | rich | |
Sce-2 | prot | 3960 | [52] | http://www.nature.com/nature/journal/v425/n6959/suppinfo/nature02046.html | nature02046-s2.xls | rich (YEPD) |
Sce-3 | mRNA | 5432 | [51] | 1.ref-abund.xls, column B | combined data | |
Escherichia coli K-12 MG1655 | ||||||
Eco-1 | prot | 138 | [46] | tables A1, A2, A3 | minimal | |
Eco-2 | prot | [79] | 47 | columns AB, RIC | rich | |
Eco-3 | prot | 69 | [47] | columns PHNppm, PSppm, NSppm | minimal (MOPS, glucose) | |
Eco-4 | mRNA | 2597 | [53] | 3181Table6.xls, column D | rich (LB) | |
Eco-5 | mRNA | 3685 | [54] | EXPSET003: PALSP01-PALSP11 | minimal (MOPS, glucose) | |
Escherichia coli K-12 W3110 | ||||||
Ecj-6 | mRNA | 3788 | [55] | ex298 – ex320, ex328-ex334 | ||
Bacillus subtilis | ||||||
Bsu-1 | mRNA | 3581 | [56] | ex745 – ex749 | rich (LB) | |
Bsu-2 | mRNA | 3590 | [57] | ex264, ex265, ex272, ex273, ex275, ex276, ex278 – ex286 | rich (LB) | |
Bsu-3 | mRNA | 3577 | [58] | ex940 – ex945 | DSM | |
Synechocystis sp. PCC6803 | ||||||
Syn-1 | mRNA | 2840 | [59] | ex832 – ex839 | low light conditions | |
Syn-2 | mRNA | 2840 | [60] | ex22, 23, 24, 44 | ||
Plasmodium falciparum 3D7 | ||||||
Pfa-1 | prot | 1068 | [61] | http://www.nature.com/nature/journal/v419/n6906/suppinfo/nature01107.html | nature01107-s1.xls | average of 4 life stages |
Pfa-2 | mRNA | 2081 | [62] | Table_1, columns I, K, Q, AB, AD, AJ, AO, AQ | average of 4 life stages |