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Figure 3 | BMC Bioinformatics

Figure 3

From: Visualization of comparative genomic analyses by BLAST score ratio

Figure 3

Visualization with GGobi. GGobi screenshots of the graphical outputs from the BSR. The proteins for tryptophan synthase alpha and beta subunits are highlighted as they were unique in the C. caviae genome and represented a significant metabolic adaptation of this species in comparison to the other species compared [17]. A. The scatter plot represents the same figure as shown in Figure 1C, however the interactive nature of GGobi allows visualization of the annotation associated with any of the peptides. B. Synteny plots as seen in GGobi. These same genes from Figure 3A can be highlighted in the in the synteny plots and the genomic location can be observed. To take advantage of the usefulness of the interactive mouseover the BSR is included with the annotation.

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