Table 7 Genes selected by ≥ 4 methods in two-class classification (ischemic vs idiopathic) with Minnesota data. The last row gives the total numbers of the genes in the final models.
From: A comparative study of discriminating human heart failure etiology using gene expression profiles
Probe Set | Gene | Rank | PPLS | PLS | SC | LSO | RF |
|---|---|---|---|---|---|---|---|
215066_at | PTPRF: protein tyrosine phosphatase, receptor type, F | 1 | X | X | Â | X | X |
212008_at | UBXD2: UBX domain containing | 2 | X | X | X | Â | X |
217234_s_at | VIL2: villin 2 (ezrin) | 3 | X | X | X | Â | X |
202092_s_at | BART1: binder of Arl Two | 5 | X | X | X | Â | X |
218318_s_at | NLK: nemo-like kinase | 7 | X | X | Â | X | X |
212062_at | ATP9A: ATPase, Class II, type 9A | 9 | X | X | X | Â | X |
218208_at | FLJ22378: hypothetical protein FLJ22378 | 13 | X | X | X | Â | X |
212093_s_at | MTSG1: mitochondrial tumor suppressor gene 1 | 14 | X | X | X | Â | X |
214543_x_at | QKI: quaking homolog, KH domain RNA binding (mouse) | 24 | X | X | X | Â | X |
209487_at | RBPMS: RNA binding protein with multiple splicing | 26 | X | X | X | X | X |
202877_s_at | C1QR1: complement component 1, q subcomponent, receptor 1 | 31 | X | X | Â | X | X |
64438_at | FLJ22222: hypothetical protein FLJ22222 | 40 | X | X | Â | X | X |
221928_at | LOC283445: hypothetical protein LOC283445 | 44 | X | X | X | Â | X |
212556_at | SCRIB: scribble | 48 | X | X | Â | X | X |
202641_at | ARL3: ADP-ribosylation factor-like 3 | 50 | Â | X | X | X | X |
201559_s_at | CLIC4: chloride intracellular channel 4 | 64 | X | X | X | Â | X |
216231_s_at | Homo sapiens transcribed sequence with strong similarity to protein pdb:3HLA (H.sapiens) B Chain B, Human Class I Histocompatibility Antigen A2.1 (HLA-A2.1 Human Leucocyte Antigen) | 73 | X | X | X | X | X |
220477_s_at | C20orf30: chromosome 20 open reading frame 30 | 76 | X | X | X | Â | X |
208879_x_at | C20orfl4: chromosome 20 open reading frame 14 | 88 | X | X | Â | X | X |
207630_s_at | CREM: cAMP responsive element modulator | 107 | X | X | Â | X | X |
212117_at | ARHQ: ras homolog gene family, member Q | 116 | X | X | X | Â | X |
212904_at | KIAA1185: KIAA1185 protein | 121 | Â | X | X | X | X |
M33197_5_at | GAPD: glyceraldehyde-3-phosphate dehydrogenase | 161 | X | X | X | Â | X |
213507_s_at | KPNB1: karyopherin (importin) beta 1 | 163 | X | X | X | Â | X |
207627_s_at | TFCP2: transcription factor CP2 | 208 | X | X | Â | X | X |
Total | - | - | 275 | 22283 | 36 | 22 | 883 |