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Table 1 Gene Ontology annotations available in Bioconductor – For the microarrays listed in this table, Bioconductor meta data packages are available. The second column gives the number of leaf nodes the third column the number of inner nodes considered when generating classifier graphs. The last column reports the ratio of probe-sets being associated with any leaf node.

From: stam – a Bioconductor compliant R package for structured analysis of microarray data

  Species Probe-sets Leaf nodes Inner nodes Annotated
hgu133a human 22283 1649 1049 67.6%
hgu133b human 22645 1136 783 30.7%
hgul33plus2 human 54675 1725 1094 44.1%
hu6800 human 7129 1300 872 84.7%
hgu95av2 human 12625 1492 966 76.2%
hgu95b human 12620 972 669 33.3%
hgu95c human 12646 895 633 27.7%
hgu95d human 12644 866 603 22.9%
hgu95e human 12639 935 641 32.1%
mgu74av2 mouse 12488 1379 934 63.5%
mgu74bv2 mouse 12411 975 696 33.7%
mgu74cv2 mouse 11934 826 590 26.0%
moe430a mouse 22690 1538 1017 61.4%
moe430b mouse 22575 997 719 21.0%
rgu34a rat 8799 974 689 46.0%
rgu34b rat 8791 403 332 7.7%
rgu34c rat 8789 439 345 8.5%
rae230a rat 15866 1032 718 23.5%
rae230b rat 15276 319 297 3.1%
yg98 yeast 6777 1028 667 80.8%
YEAST yeast 5799 1030 668 99.9%