From: Pathway level analysis of gene expression using singular value decomposition
Comparison | (genes in data set/total genes in pathway) Pathway | p | change |
---|---|---|---|
C vs. N | (14/45) gamma-Hexachlorocyclohexane degradation | <0.0001 | down |
 | (15/39) Prostaglandin and leukotriene metabolism | <0.0001 | up |
 | (11/24) O-Glycans biosynthesis | <0.0001 | up |
 | (6/21) Pentose and glucuronate interconversions | <0.0001 | up |
 | (24/34) Glutathione metabolism | <0.0001 | up |
 | (3/12) Lectin Induced Complement Pathway | 0.0004 | down |
 | (11/19) Chaperones modulate interferon Signaling Pathway | 0.0006 | up |
 | (6/15) TACI and BCMA stimulation of B cell immune responses. | 0.0044 | down |
 | (3/6) Tetrachloroethene degradation | 0.0054 | up |
 | (3/6) FXR and LXR Regulation of Cholesterol Metabolism | 0.0062 | down |
 | (4/7) TSP-1 Induced Apoptosis in Microvascular Endothelial Cell | 0.0065 | down |
 | (16/28) Galactose metabolism | 0.0067 | down |
 | (13/20) Biosynthesis of steroids | 0.0164 | up |
 | (7/11) Map Kinase Inactivation of SMRT Corepressor | 0.0274 | down |
 | (25/68) Nicotinate and nicotinamide metabolism | 0.0279 | up |
 | (4/14) Classical Complement Pathway | 0.0314 | down |
 | (6/19) Complement Pathway | 0.0364 | down |
 | (9/13) Nucleotide sugars metabolism | 0.0369 | up |
 | (3/3) Degradation of the RAR and RXR by the proteasome | 0.0396 | down |
F vs. C | (3/12) Lectin Induced Complement Pathway | 0.0068 | up |
 | (13/20) Biosynthesis of steroids | 0.0083 | down |
 | (24/34) Glutathione metabolism | 0.0403 | down |
F vs. N | (14/45) gamma-Hexachlorocyclohexane degradation | 0.0321 | down |