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Figure 2 | BMC Bioinformatics

Figure 2

From: Modeling the emergence of multi-protein dynamic structures by principles of self-organization through the use of 3DSpi, a multi-agent-based software

Figure 2

Number of structures generated using 3DSpi. A and B: Number of structures generated as a function of the COS value. The following parameters were used: Protein number: 216; Number ratio: 0.5; Size ratio: 3. The program was run for 106 time points. In B an enlargement of the right part of the figure in A is shown, on a semi-logarithmic scale. The mean observed during the last 50000 time points in one simulation is shown. The bar indicates the minimum and maximum value observed. C: Number of structures generated as a function of time using three different COS values (see the right part of the picture). The mean observed on 20 independent simulations is shown, and the bar indicates the minimum and maximum value observed in all of those simulations. Protein number: 216; Number ratio: 0.5; Size ratio: 3.

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BMC Bioinformatics

ISSN: 1471-2105

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