TY - JOUR AU - Gilks, W. R. AU - Audit, B. AU - De Angelis, D. AU - Tsoka, S. AU - Ouzounis, C. A. PY - 2002 DA - 2002// TI - Modeling the percolation of annotation errors in a database of protein sequences JO - Bioinformatics VL - 18 UR - https://doi.org/10.1093/bioinformatics/18.12.1641 DO - 10.1093/bioinformatics/18.12.1641 ID - Gilks2002 ER - TY - JOUR AU - Boeckmann, B. AU - Bairoch, A. AU - Apweiler, R. AU - Blatter, M. C. AU - Estreicher, A. AU - Gasteiger, E. AU - Martin, M. J. AU - Michoud, K. AU - O'Donovan, C. AU - Phan, I. AU - Pilbout, S. AU - Schneider, M. PY - 2003 DA - 2003// TI - The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003 JO - Nucleic Acids Res VL - 31 UR - https://doi.org/10.1093/nar/gkg095 DO - 10.1093/nar/gkg095 ID - Boeckmann2003 ER - TY - JOUR AU - Yandell, M. D. AU - Majoros, W. H. PY - 2002 DA - 2002// TI - Genomics and natural language processing JO - Nat Rev Genet VL - 3 ID - Yandell2002 ER - TY - JOUR AU - Bateman, A. AU - Birney, E. AU - Cerruti, L. AU - Durbin, R. AU - Etwiller, L. AU - Eddy, S. R. AU - Griffiths-Jones, S. AU - Howe, K. L. AU - Marshall, M. AU - Sonnhammer, E. L. PY - 2002 DA - 2002// TI - The Pfam protein families database JO - Nucleic Acids Res VL - 30 UR - https://doi.org/10.1093/nar/30.1.276 DO - 10.1093/nar/30.1.276 ID - Bateman2002 ER - TY - JOUR AU - Casari, G. AU - Sander, C. AU - Valencia, A. PY - 1995 DA - 1995// TI - A method to predict functional residues in proteins JO - Nat Struct Biol VL - 2 UR - https://doi.org/10.1038/nsb0295-171 DO - 10.1038/nsb0295-171 ID - Casari1995 ER - TY - JOUR AU - Altschul, S. F. AU - Madden, T. L. AU - Schaffer, A. A. AU - Zhang, J. AU - Zhang, Z. AU - Miller, W. AU - Lipman, D. J. PY - 1997 DA - 1997// TI - Gapped BLAST and PSI-BLAST: a new generation of protein database search programs JO - Nucleic Acids Res VL - 25 UR - https://doi.org/10.1093/nar/25.17.3389 DO - 10.1093/nar/25.17.3389 ID - Altschul1997 ER - TY - JOUR AU - Vonrhein, C. AU - Bonisch, H. AU - Schafer, G. AU - Schulz, G. E. PY - 1998 DA - 1998// TI - The structure of a trimeric archaeal adenylate kinase JO - J Mol Biol VL - 282 UR - https://doi.org/10.1006/jmbi.1998.2003 DO - 10.1006/jmbi.1998.2003 ID - Vonrhein1998 ER - TY - JOUR AU - Galperin, M. Y. AU - Koonin, E. V. PY - 1998 DA - 1998// TI - Sources of systematic error in functional annotation of genomes: domain rearrangement, non-orthologous gene displacement and operon disruption JO - In Silico Biol VL - 1 ID - Galperin1998 ER - TY - JOUR AU - Curnow, A. W. AU - Hong, K. AU - Yuan, R. AU - Kim, S. AU - Martins, O. AU - Winkler, W. AU - Henkin, T. M. AU - Soll, D. PY - 1997 DA - 1997// TI - Glu-tRNAGln amidotransferase: a novel heterotrimeric enzyme required for correct decoding of glutamine codons during translation JO - Proc Natl Acad Sci U S A VL - 94 UR - https://doi.org/10.1073/pnas.94.22.11819 DO - 10.1073/pnas.94.22.11819 ID - Curnow1997 ER - TY - JOUR AU - Tumbula, D. L. AU - Becker, H. D. AU - Chang, W. Z. AU - Soll, D. PY - 2000 DA - 2000// TI - Domain-specific recruitment of amide amino acids for protein synthesis JO - Nature VL - 407 UR - https://doi.org/10.1038/35024120 DO - 10.1038/35024120 ID - Tumbula2000 ER - TY - JOUR AU - Ludwig, J. AU - Kerscher, S. AU - Brandt, U. AU - Pfeiffer, K. AU - Getlawi, F. AU - Apps, D. K. AU - Schagger, H. PY - 1998 DA - 1998// TI - Identification and characterization of a novel 9.2-kDa membrane sector-associated protein of vacuolar proton-ATPase from chromaffin granules JO - J Biol Chem VL - 273 UR - https://doi.org/10.1074/jbc.273.18.10939 DO - 10.1074/jbc.273.18.10939 ID - Ludwig1998 ER - TY - JOUR AU - Nanji, M. AU - Coronado, V. A. AU - Cox, D. W. PY - 2001 DA - 2001// TI - ATP6H, a subunit of vacuolar ATPase involved in metal transport: evaluation in canine copper toxicosis JO - Mamm Genome VL - 12 UR - https://doi.org/10.1007/s00335-001-2059-1 DO - 10.1007/s00335-001-2059-1 ID - Nanji2001 ER - TY - JOUR AU - Rizzo, V. F. AU - Coskun, U. AU - Radermacher, M. AU - Ruiz, T. AU - Armbruster, A. AU - Gruber, G. PY - 2003 DA - 2003// TI - Resolution of the V1 ATPase from Manduca sexta into subcomplexes and visualization of an ATPase-active A3B3EG complex by electron microscopy JO - J Biol Chem VL - 278 UR - https://doi.org/10.1074/jbc.M208623200 DO - 10.1074/jbc.M208623200 ID - Rizzo2003 ER - TY - JOUR AU - Merzendorfer, H. AU - Huss, M. AU - Schmid, R. AU - Harvey, W. R. AU - Wieczorek, H. PY - 1999 DA - 1999// TI - A novel insect V-ATPase subunit M9.7 is glycosylated extensively JO - J Biol Chem VL - 274 UR - https://doi.org/10.1074/jbc.274.24.17372 DO - 10.1074/jbc.274.24.17372 ID - Merzendorfer1999 ER - TY - JOUR AU - Wieczorek, H. AU - Grber, G. AU - Harvey, W. R. AU - Huss, M. AU - Merzendorfer, H. AU - Zeiske, W. PY - 2000 DA - 2000// TI - Structure and regulation of insect plasma membrane H(+)V-ATPase JO - J Exp Biol VL - 203 ID - Wieczorek2000 ER - TY - BOOK AU - Kluge, C. AU - Tavakoli, N. AU - Golldack, D. AU - Dietz, K. PY - 2002 DA - 2002// TI - Unpublished ID - Kluge2002 ER - TY - JOUR AU - Hill, K. J. AU - Stevens, T. H. PY - 1994 DA - 1994// TI - Vma21p is a yeast membrane protein retained in the endoplasmic reticulum by a di-lysine motif and is required for the assembly of the vacuolar H(+)-ATPase complex JO - Mol Biol Cell VL - 5 UR - https://doi.org/10.1091/mbc.5.9.1039 DO - 10.1091/mbc.5.9.1039 ID - Hill1994 ER - TY - JOUR AU - Pietrokovski, S. PY - 1996 DA - 1996// TI - Searching databases of conserved sequence regions by aligning protein multiple-alignments JO - Nucleic Acids Res VL - 24 UR - https://doi.org/10.1093/nar/24.19.3836 DO - 10.1093/nar/24.19.3836 ID - Pietrokovski1996 ER - TY - JOUR AU - Schmalisch, M. AU - Langbein, I. AU - Stulke, J. PY - 2002 DA - 2002// TI - The general stress protein Ctc of Bacillus subtilis is a ribosomal protein JO - J Mol Microbiol Biotechnol VL - 4 ID - Schmalisch2002 ER - TY - JOUR AU - Enright, A. J. AU - Ouzounis, C. A. PY - 2001 DA - 2001// TI - BioLayout – an automatic graph layout algorithm for similarity visualization JO - Bioinformatics VL - 17 UR - https://doi.org/10.1093/bioinformatics/17.9.853 DO - 10.1093/bioinformatics/17.9.853 ID - Enright2001 ER - TY - JOUR AU - Thompson, J. D. AU - Higgins, D. G. AU - Gibson, T. J. PY - 1994 DA - 1994// TI - CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice JO - Nucleic Acids Res VL - 22 UR - https://doi.org/10.1093/nar/22.22.4673 DO - 10.1093/nar/22.22.4673 ID - Thompson1994 ER - TY - JOUR AU - Pearl, F. M. AU - Bennett, C. F. AU - Bray, J. E. AU - Harrison, A. P. AU - Martin, N. AU - Shepherd, A. AU - Sillitoe, I. AU - Thornton, J. AU - Orengo, C. A. PY - 2003 DA - 2003// TI - The CATH database: an extended protein family resource for structural and functional genomics JO - Nucleic Acids Res VL - 31 UR - https://doi.org/10.1093/nar/gkg062 DO - 10.1093/nar/gkg062 ID - Pearl2003 ER - TY - JOUR AU - Enright, A. J. AU - Kunin, V. AU - Ouzounis, C. A. PY - 2003 DA - 2003// TI - Protein families and TRIBES in genome sequence space JO - Nucleic Acids Res VL - 31 UR - https://doi.org/10.1093/nar/gkg495 DO - 10.1093/nar/gkg495 ID - Enright2003 ER - TY - JOUR AU - Ouzounis, C. A. AU - Coulson, R. M. AU - Enright, A. J. AU - Kunin, V. AU - Pereira-Leal, J. B. PY - 2003 DA - 2003// TI - Classification schemes for protein structure and function JO - Nat Rev Genet VL - 4 UR - https://doi.org/10.1038/nrg1113 DO - 10.1038/nrg1113 ID - Ouzounis2003 ER - TY - JOUR AU - Enright, A. J. AU - Ouzounis, C. A. PY - 2000 DA - 2000// TI - GeneRAGE: a robust algorithm for sequence clustering and domain detection JO - Bioinformatics VL - 16 UR - https://doi.org/10.1093/bioinformatics/16.5.451 DO - 10.1093/bioinformatics/16.5.451 ID - Enright2000 ER -